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科研机构
大连理工大学 [10]
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期刊论文 [6]
会议论文 [4]
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2019 [4]
2018 [2]
2015 [1]
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专题:大连理工大学
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KeSACNN: a protein-protein interaction article classification approach based on deep neural network
期刊论文
INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, 2019, 卷号: 22, 页码: 131-148
作者:
Luo, Ling
;
Yang, Zhihao
;
Wang, Lei
;
Zhang, Yin
;
Lin, Hongfei
收藏
  |  
浏览/下载:9/0
  |  
提交时间:2019/12/02
PPI article classification
self-attention
convolutional neural network
domain knowledge
Knowledge-aware attention network for protein-protein interaction extraction
期刊论文
Journal of biomedical informatics, 2019, 卷号: 96, 页码: 103234
作者:
Zhou Huiwei
;
Liu Zhuang
;
Ning Shixian
;
Lang Chengkun
;
Lin Yingyu
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2019/12/02
Attention mechanism,PPI extraction,Prior knowledge
Protein Complexes Detection Based on Global Network Representation Learning
会议论文
Proceedings - 2018 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018
作者:
Xu, B.
;
Li, K.
;
Liu, X.
;
Liu, D.
;
Zhang, Y.
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/02
Bioinformatics
Embeddings
Proteins, Biological information
Cellular organization
Global representation
Network embedding
Ppi networks
Protein complexes
Protein-protein interaction networks
Vector representations, Complex networks
Improving neural protein-protein interaction extraction with knowledge selection
期刊论文
Computational Biology and Chemistry, 2019, 卷号: 83, 页码: 107146
作者:
Zhou, Huiwei
;
Li, Xuefei
;
Yao, Weihong
;
Liu, Zhuang
;
Ning, Shixian
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/12/02
Knowledge selection,Mutual attention,PPI extraction,Prior knowledge
Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach
会议论文
PROCEEDINGS 2018 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2018-01-01
作者:
Luo, Ling
;
Yang, Zhihao
;
Wang, Lei
;
Zhang, Yin
;
Lin, Hongfei
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/02
PPI article classification
self-attention
convolutional neural network
domain knowledge
Reconstruction of the Protein-Protein Interaction Network for Protein Complexes Identification by Walking on the Protein Pair Fingerprints Similarity Network
期刊论文
FRONTIERS IN GENETICS, 2018, 卷号: 9, 页码: 272
作者:
Xu, Bo
;
Liu, Yu
;
Lin, Chi
;
Dong, Jie
;
Liu, Xiaoxia
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/02
protein complex
PPI network
network reconstruction
PPI prediction
bioinformatic
Inferring plant microRNA functional similarity using a weighted protein-protein interaction network
期刊论文
BMC BIOINFORMATICS, 2015, 卷号: 16, 页码: 361
作者:
Meng, Jun
;
Liu, Dong
;
Luan, Yushi
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/09
miRNA
Functional similarity
PPI
Gene Ontology
Integrating Active Learning Strategy to the Ensemble Kernel-based Method for Protein-Protein Interaction Extraction
期刊论文
CHINESE JOURNAL OF ELECTRONICS, 2013, 卷号: 22, 页码: 41-45
作者:
Li, Lishuang
;
Huang, Degen
;
Wang, Min
;
Jiang, Zhenchao
收藏
  |  
浏览/下载:1/0
  |  
提交时间:2019/12/11
Protein-protein interaction (PPI)
Combined kernel
Active learning
SVM
Ontology integration to identify protein complex in protein interaction networks
会议论文
IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Hong Kong, HONG KONG, 2010-12-18
作者:
Xu, Bo
;
Lin, Hongfei
;
Yang, Zhihao
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/24
Protein complex
PPI networks
Gene Ontology
Protein-Protein Interaction Extraction from Biomedical Literatures Based on Modified SVM-KNN
会议论文
IEEE International Conference on Natural Language Processing and Knowledge Engineering, Dalian, PEOPLES R CHINA, 2009-09-24
作者:
Li, Lishuang
;
Jing, Linmei
;
Huang, Degen
收藏
  |  
浏览/下载:2/0
  |  
提交时间:2019/12/24
PPI
SVM
KNN
SVM-KNN
unbalanced data distribution
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