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科研机构
武汉大学 [5]
西安交通大学 [2]
上海大学 [2]
复旦大学上海医学院 [2]
数学与系统科学研究院 [1]
心理研究所 [1]
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期刊论文 [16]
会议论文 [3]
发表日期
2016 [19]
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Identify signature regulatory network for glioblastoma prognosis by integrative mRNA and miRNA co-expression analysis
期刊论文
IET SYSTEMS BIOLOGY, 2016, 卷号: 10, 页码: 244-251
作者:
Bing, Zhi-Tong
;
Yang, Guang-Hui
;
Xiong, Jie
;
Guo, Ling
;
Yang, Lei
收藏
  |  
浏览/下载:25/0
  |  
提交时间:2018/05/31
RNA
molecular biophysics
genetics
cancer
signature regulatory network
glioblastoma prognosis
mRNA coexpression analysis
miRNA coexpression analysis
glioblastoma multiforme
brain tumour
microRNAs
pathogenesis
genome-wide regulatory networks
miRNA-mRNA pairs
weighted gene coexpression network analysis
survival analysis
GBM prognosis
integration analysis
neuropilin-1 gene
module turquoise
molecular regulatory mechanisms
Adaptive modelling of gene regulatory network using Bayesian information criterion-guided sparse regression approach
期刊论文
IET SYSTEMS BIOLOGY, 2016, 卷号: 10, 期号: 6, 页码: 252-259
作者:
Shi, Ming
;
Shen, Weiming
;
Wang, Hong-Qiang
;
Chong, Yanwen
收藏
  |  
浏览/下载:21/0
  |  
提交时间:2017/12/18
Genetics
Bayes Methods
Genomics
Regression Analysis
Inference Mechanisms
Bioinformatics
Adaptive Modelling
Gene Regulatory Network
Bayesian Information Criterion-guided Sparse Regression Approach
Grn
Microarray Expression Data
Systems Biology
Grn Reconstruction
Optimisation
l(1)-norm Regularisation
A new gene regulatory network model based on BP algorithm for interrogating differentially expressed genes of Sea Urchin
期刊论文
SPRINGERPLUS, 2016, 卷号: 5, 期号: 1, 页码: 1911
作者:
Liu, Longlong
;
Zhao, Tingting
;
Ma, Meng
;
Wang, Yan
;
Wang Y(王燕)
收藏
  |  
浏览/下载:20/0
  |  
提交时间:2017/01/13
BP algorithm
Gene regulatory network
Neural network model
Differentially expressed Sea Urchin genes
Modeling the causal regulatory network by integrating chromatin accessibility and transcriptome data
期刊论文
NATIONAL SCIENCE REVIEW, 2016, 卷号: 3, 期号: 2, 页码: 240-251
作者:
Wang, Yong
;
Jiang, Rui
;
Wong, Wing Hung
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  |  
浏览/下载:12/0
  |  
提交时间:2018/07/30
gene regulatory network
open chromatin
DNA accessibility
transcription factor colocalization
statistical model
data integration
Hsa-miR-137, hsa-miR-520e and hsa-miR-590-3p perform crucial roles in Lynch syndrome
期刊论文
ONCOLOGY LETTERS, 2016, 卷号: 12, 期号: 3
作者:
Zhou, Changyu
;
Li, Jiayu
;
Li, Jiarui
;
Wan, Yingchun
;
Li, Tao
收藏
  |  
浏览/下载:7/0
  |  
提交时间:2019/12/05
Lynch syndrome
differentially expressed miRNA
target gene
regulatory network
Practical Guidelines for Incorporating Knowledge-Based and Data-Driven Strategies into the Inference of Gene Regulatory Networks
期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2016, 卷号: 13, 期号: 1
作者:
Hsiao, Yu-Ting
;
Lee, Wei-Po
;
Yang, Wei
;
Mueller, Stefan
;
Flamm, Christoph
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/12/05
Prior knowledge-mapping
S-system
gene regulatory network modeling
evolutionary algorithms
Knockdown of EWSR1/FLI1 expression alters the transcriptome of Ewing sarcoma cells in vitro
期刊论文
JOURNAL OF BONE ONCOLOGY, 2016, 卷号: 5, 期号: [db:dc_citation_issue], 页码: 153-158
作者:
Wang, Jihan
;
Jiang, Wenyan
;
Yan, Yuzhu
;
Chen, Chu
;
Yu, Yan
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/12/02
Transcriptional factors-gene regulatory network
Ewing sarcoma
Ewsr1/fli1 fusion protein
Transcriptome
Inferring Gene Regulatory Networks Based on Spline Regression and Bayesian Group Lasso
会议论文
作者:
Fan, Yue
;
Peng, Qinke
收藏
  |  
浏览/下载:5/0
  |  
提交时间:2019/11/26
Gibbs sampling
Gene regulatory network
Bayesian group variable selection
Spline regression
Performance and Improvement of Tree-Based Methods for Gene Regulatory Network Reconstruction
会议论文
作者:
Shi, Ming
;
Pan, Shao-Ming
;
Chong, Yan-Wen
收藏
  |  
浏览/下载:8/0
  |  
提交时间:2019/12/05
Gene expression data
Gene regulatory network
DREAM challenge
Tree-based method
Random Forest
Modified version
Oscillatory expression in Escherichia coli mediated by microRNAs with transcriptional and translational time delays
期刊论文
IET SYSTEMS BIOLOGY, 2016, 卷号: 10, 页码: 203-209
作者:
Zhang, Yuan[1]
;
Liu, Haihong[2]
;
Zhou, Jin[3]
收藏
  |  
浏览/下载:3/0
  |  
提交时间:2019/04/26
microorganisms
genetics
RNA
molecular biophysics
bifurcation
oscillatory expression
gene regulatory network
Escherichia coli
microRNAs
transcriptional time delays
translational time delays
stability
Hopf bifurcation
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