The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange

doi:10.1016/j.aquaculture.2022.739156

CORC > 烟台海岸带研究所 > 中国科学院烟台海岸带研究所 > 中科院海岸带环境过程与生态修复重点实验室

	The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange
	Zhang, Xiaoli 4; Dong, Hongbiao 3; Zheng, Pengfei 2,4; Li, Guihao 1,4; He, Cui 1; Guo, Xiaohong 2,4; Zhang, Jiasong 3; Gong, Jun 1
刊名	AQUACULTURE
	2023-03-15
卷号	566 页码:13
关键词	Biofilm Macro -aggregate Intensive aquaculture systems Bacteria Micro-eukaryotes
ISSN号	0044-8486
DOI	10.1016/j.aquaculture.2022.739156
通讯作者	Zhang, Jiasong(jiasongzhang@hotmail.com) ; Gong, Jun(gongj27@mail.sysu.edu.cn)
英文摘要	Microbes are important in not only driving matter cycling, modulating water quality, but also serving as food for animals in intensive aquaculture systems, in which artificial substrates in combination of biofloc technology can be applied to strengthen microbial values and animal production. However, the influence of micro-habitats created by these practices on water quality and microbial diversity and dynamics remains poorly understood. In this study, samples of three micro-habitats, the biofilms formed on immersed meshes, the suspended macro -aggregates, and the pond water were collected from limited-water-exchange ponds for rearing Litopenaeus van-namei during a period of 80 days. Using high-throughput sequencing of 16S and 18S rRNA genes and statistical analyses, we found that the community structures of both bacteria and micro-eukaryotes were similar between biofilms and macro-aggregates (ANOVA, P > 0.05), but significantly different from those in the water (P < 0.05). Alphaproteobacteria and Bacteroidetes were more enriched in the biofilms and macro-aggregates, while Cya-nobacteria and Actinobacteria occurred more in the water. Chlorophyta and Fungi were selectively enriched in the micro-eukaryotic communities of biofilms and macro-aggregates, while Ciliophora, Dinophyta, Bacillar-iophyta and Cercozoa were more abundant in the water. There were also significant dynamics of both bacterial and micro-eukaryotic communities in a specific micro-habitat, with Rhodobacteraceae, Cyanobacteria and Fungi being generally prevalent at the earlier rearing stage, while Bacteroidetes, Chlorophyta and parasitic Apicom-plexa becoming more abundant at the later stage. However, deployment of substrates and addition of molasses to the water did not significantly alter community structures of both bacteria and micro-eukaryotic communities across all samples (ANOSIM, P > 0.05). Functionally, microbes in both biofilms and macro-aggregates exhibited higher potentials of organic matter degradation and nitrogen removal, supporting the usefulness of application of biofloc technology and biofilms in recycling waste and nutrients in the shrimp ponds with limited water exchange.
WOS关键词	LITOPENAEUS-VANNAMEI ; BIOFILM ; CULTURE ; CARBON ; QUALITY ; GROWTH ; SUCCESSION ; DIVERSITY ; ECOLOGY ; FRESH
WOS研究方向	Fisheries ; Marine & Freshwater Biology
语种	英语
WOS记录号	WOS:000921497300001
资助机构	National Science Foundation of China ; Central Public-interest Scientific Institution Basal Research Fund, CAFS ; Science and Technology Development Program of Yantai
内容类型	期刊论文
源URL	[http://ir.yic.ac.cn/handle/133337/32077]
专题	烟台海岸带研究所_中科院海岸带环境过程与生态修复重点实验室
通讯作者	Zhang, Jiasong; Gong, Jun
作者单位	1.Sun Yat Sen Univ, Sch Marine Sci, Lab Microbial Ecol & Matter Cycles, Zhuhai 519082, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Chinese Acad Fishery Sci, South China Sea Fisheries Res Inst, Key Lab South China Sea Fishery Resources Exploita, Minist Agr, Guangzhou 510300, Peoples R China 4.Chinese Acad Sci, CAS, Yantai Inst Coastal Zone Res, Key Lab Coastal Environm Proc & Ecol Remediat, Yantai 264003, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Xiaoli,Dong, Hongbiao,Zheng, Pengfei,et al. The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange[J]. AQUACULTURE,2023,566:13.
APA	Zhang, Xiaoli.,Dong, Hongbiao.,Zheng, Pengfei.,Li, Guihao.,He, Cui.,...&Gong, Jun.(2023).The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange.AQUACULTURE,566,13.
MLA	Zhang, Xiaoli,et al."The habitat differentiation, dynamics and functional potentials of bacterial and micro-eukaryotic communities in shrimp aquaculture systems with limited water exchange".AQUACULTURE 566(2023):13.