Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage

doi:10.1007/s00284-021-02423-x

	Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage
	Zhao, Dan 2; Yang, Jian 2; Liu, Tao 2; Lu, Dong 3; Zhang, Shuang 2; Yan, Lei 2; Ni, Yongqing 1
刊名	CURRENT MICROBIOLOGY
	2021-03-04
页码	11
ISSN号	0343-8651
DOI	10.1007/s00284-021-02423-x
通讯作者	Yan, Lei(hekouyanlei@gmail.com) ; Ni, Yongqing(niyqlzu@sina.com)
英文摘要	The present work reported the complete genome sequence analysis of Acidithiobacillus ferrivorans strain XJFY6S-08 isolated from acid mine drainage in Fuyun copper mine in Xinjiang, China, revealing the potential for extreme environmental adaptation. The strain XJFY6S-08 possesses 3,161,380 bp in length and 56.55% GC content. Genomic analysis revealed that this strain harbors metal-tolerant genes coding for the mer operon, arsRBC operon and a variety of metal assimilation and efflux proteins. Genes coding for K+/H+ transporting ATPase and the Na+/H+ antiporter gene nhaA for pH adaptation were identified. The presence of genes associated with various DNA repair enzymes and the synthesis of mycosporine-like amino acids precursor support the UVR resistance mechanisms. The genes related to membrane modifications (ppiBCD, slyD, surA, cfa and fabF) and resistance-nodulation-division (RND) family can play a crucial role in organic solvents tolerance. The strain XJFY6S-08 resists low-temperature conditions by a set of mechanisms such as changes of RNA metabolism, transmembrane transport, compatible solutes and transport, biofilm and EPS formation, chemotaxis and motility and ROS scavenging. These findings can provide important information for further studying the comparative genome and environmental adaptation mechanism of A. ferrivorans.
资助项目	Technology Program of Land Reclamation General Bureau of Heilongjiang[HKKY190406] ; Heilongjiang Provincial Natural Science Foundation of China[LH2020C079] ; Heilongjiang Bayi Agricultural University[ZRCQC202008] ; Longjiang Scholar Program of Heilongjiang Province[Q201815] ; Talent Training Program under Special Funds Supporting the Development of Local Universities from the Central Finance[HFBE[2019]465] ; Program of Science and Technology Innovation Team of the Heilongjiang Higher Education Institutions[2012TD006]
WOS研究方向	Microbiology
语种	英语
出版者	SPRINGER
WOS记录号	WOS:000625053500003
资助机构	Technology Program of Land Reclamation General Bureau of Heilongjiang ; Heilongjiang Provincial Natural Science Foundation of China ; Heilongjiang Bayi Agricultural University ; Longjiang Scholar Program of Heilongjiang Province ; Talent Training Program under Special Funds Supporting the Development of Local Universities from the Central Finance ; Program of Science and Technology Innovation Team of the Heilongjiang Higher Education Institutions
内容类型	期刊论文
源URL	[http://119.78.100.186/handle/113462/137700]
专题	中国科学院近代物理研究所
通讯作者	Yan, Lei; Ni, Yongqing
作者单位	1.Shihezi Univ, Sch Food Sci, Shihezi 832003, Xinjiang, Peoples R China 2.Heilongjiang Bayi Agr Univ, Coll Life Sci & Biotechnol, Heilongjiang Prov Key Lab Environm Microbiol & Re, Daqing 163319, Peoples R China 3.Chinese Acad Sci, Inst Modern Phys, Lanzhou 730000, Peoples R China
推荐引用方式 GB/T 7714	Zhao, Dan,Yang, Jian,Liu, Tao,et al. Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage[J]. CURRENT MICROBIOLOGY,2021:11.
APA	Zhao, Dan.,Yang, Jian.,Liu, Tao.,Lu, Dong.,Zhang, Shuang.,...&Ni, Yongqing.(2021).Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage.CURRENT MICROBIOLOGY,11.
MLA	Zhao, Dan,et al."Complete Genome Sequence Analysis of Acidithiobacillus ferrivorans XJFY6S-08 Reveals Environmental Adaptation to Alpine Acid Mine Drainage".CURRENT MICROBIOLOGY (2021):11.