The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China

doi:10.1080/23802359.2019.1597649

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	The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China
	Li, Hui 3,4; Li, Jingrui 2,3,4; Bai, Hongtong 3,4; Shi, Lei 3,4; Wang, Huafang
刊名	MITOCHONDRIAL DNA PART B-RESOURCES
	2019
卷号	4 期号:1 页码:1352-1353
关键词	Chloroplast genome Lavandula angustifolia 'Jingxun 2' de novo sequencing phylogenetic relationship
DOI	10.1080/23802359.2019.1597649
文献子类	Article
英文摘要	The chloroplast genome of 'Jingxun 2,' a new cultivar of Lavandula angustifolia, was sequenced in view of its role as an economically important aromatic plant with wide applications. De novo assembly with whole genome sequencing data completed the chloroplast genome (cp genome) of 151,459 bp in length, which included two inverted repeats (IRs) blocks of 25,467 bp, separated by the large single-copy (LSC) block of 82,945 bp and small single-copy (SSC) block of 17,580 bp. The genome encoded 123 genes consisting of 86 protein-coding genes, 29 tRNA genes, and 8 rRNA genes. The overall AT content of L. angustifolia cp genome is 62.04%. The AT contents of the LSC, SSC, and IR regions were 64.05, 68.14, and 56.66%, respectively. Further, a maximum-likelihood (ML) phylogenetic tree was reconstructed to indicate relationships among taxa Lamiaceae. The complete chloroplast genome of L. angustifolia provides utility information for aromatic plants evolutionary and genomic studies.
学科主题	Genetics & Heredity
电子版国际标准刊号	2380-2359
出版地	ABINGDON
WOS研究方向	Genetics & Heredity
语种	英语
出版者	TAYLOR & FRANCIS LTD
WOS记录号	WOS:000462998900001
资助机构	International Science and Technology Cooperation Program of China [2015DFR3096] ; National Natural Science Foundation of ChinaNational Natural Science Foundation of China (NSFC) [31701956]
内容类型	期刊论文
源URL	[http://ir.ibcas.ac.cn/handle/2S10CLM1/19477]
专题	中科院北方资源植物重点实验室
作者单位	1.Univ Chinese Acad Sci, Inst Bot, Beijing, Peoples R China 2.Chinese Acad Sci, Inst Bot, Beijing Bot Garden, Beijing, Peoples R China 3.Chinese Acad Sci, Inst Bot, Key Lab Plant Resources, Beijing, Peoples R China 4.Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Natl Engn Lab Tree Breeding, Beijing 100083, Peoples R China
推荐引用方式 GB/T 7714	Li, Hui,Li, Jingrui,Bai, Hongtong,et al. The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2019,4(1):1352-1353.
APA	Li, Hui,Li, Jingrui,Bai, Hongtong,Shi, Lei,&Wang, Huafang.(2019).The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China.MITOCHONDRIAL DNA PART B-RESOURCES,4(1),1352-1353.
MLA	Li, Hui,et al."The complete chloroplast genome sequence of Lavandula angustifolia (Lamiaceae), an introduced aromatic plant growing in China".MITOCHONDRIAL DNA PART B-RESOURCES 4.1(2019):1352-1353.