Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding

doi:10.1371/journal.pone.0235159

CORC > 深海科学与工程研究所 > 中国科学院深海科学与工程研究所 > 深海科学研究部 > 深海生物学研究室 > 海洋生物生态与进化研究组

	Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding
	Pitz, Kathleen J.2; Guo, Jinchen 1; Johnson, Shannon B.2; Campbell, Tracy L.1; Zhang, Haibin 2,3; Vrijenhoek, Robert C.2; Chavez, Francisco P.2; Geller, Jonathan 1
刊名	PLOS ONE
	2020-06-25
卷号	15 期号:6 页码:20
ISSN号	1932-6203
DOI	10.1371/journal.pone.0235159
英文摘要	Within the southern California Current ecosystem there are two well-documented breaks in marine community structure at Point Conception and Punta Eugenia. We explored the presence of similar breaks in a diverse zooplankton community through metabarcoding of mixed net tow tissue samples collected during an expedition from Monterey to Baja California in February of 2012. We recovered a high diversity of species as well as patterns of species presence that align with their previously documented ranges in this region. We found a clear break at Punta Eugenia in overall zooplankton community structure, while Point Conception was weakly linked to changes in community structure. We analyzed this dataset through two parallel bioinformatic pipelines to examine the robustness of these results. Our overall conclusions were consistent across both pipelines, however there were differences in species detection. This study illustrates the utility of metabarcoding analysis on mixed tissue samples for recovering known patterns of diversity, as well as allowing elucidation of broad patterns of community differentiation across many groups of organisms.
资助项目	David and Lucile Packard Foundation at MBARI ; NSF[OISE1243541] ; NASA under the National Ocean Partnership Program[NNX14AP62A] ; NASA under the National Ocean Partnership Program[NOPP RFP NOAA-NOS-IOOS-2014-2003803] ; NASA under the National Ocean Partnership Program (U.S. Integrated Ocean Observing System (IOOS) Program Office)[NNX14AP62A] ; NASA under the National Ocean Partnership Program (NOAA Ocean Exploration program)[NNX14AP62A] ; SIO Pelagic Invertebrates Collection ; David and Lucile Packard Foundation ; NASA ; NOPP ; NOAA ; BOEM ; IOOS
WOS关键词	EL-NINO ; NORTHERN CALIFORNIA ; VARIABILITY ; COASTAL ; PATTERNS ; OREGON ; BIODIVERSITY
WOS研究方向	Science & Technology - Other Topics
语种	英语
出版者	PUBLIC LIBRARY SCIENCE
WOS记录号	WOS:000545747200096
资助机构	David and Lucile Packard Foundation at MBARI ; NSF ; NASA under the National Ocean Partnership Program ; NASA under the National Ocean Partnership Program (U.S. Integrated Ocean Observing System (IOOS) Program Office) ; NASA under the National Ocean Partnership Program (NOAA Ocean Exploration program) ; SIO Pelagic Invertebrates Collection ; David and Lucile Packard Foundation ; NASA ; NOPP ; NOAA ; BOEM ; IOOS
内容类型	期刊论文
源URL	[http://ir.idsse.ac.cn/handle/183446/7734]
专题	深海科学研究部_深海生物学研究室_海洋生物生态与进化研究组
通讯作者	Pitz, Kathleen J.
作者单位	1.Moss Landing Marine Labs, Pob 450, Moss Landing, CA 95039 USA 2.Monterey Bay Aquarium Res Inst, Moss Landing, CA 95039 USA 3.Chinese Acad Sci, Inst Deep Sea Sci & Engn, Sanya, Peoples R China
推荐引用方式 GB/T 7714	Pitz, Kathleen J.,Guo, Jinchen,Johnson, Shannon B.,et al. Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding[J]. PLOS ONE,2020,15(6):20.
APA	Pitz, Kathleen J..,Guo, Jinchen.,Johnson, Shannon B..,Campbell, Tracy L..,Zhang, Haibin.,...&Geller, Jonathan.(2020).Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding.PLOS ONE,15(6),20.
MLA	Pitz, Kathleen J.,et al."Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding".PLOS ONE 15.6(2020):20.