ERV-Net: An efficient 3D residual neural network for brain tumor segmentation

doi:10.1016/j.eswa.2021.114566

CORC > 自动化研究所 > 中国科学院自动化研究所 > 数字内容技术与服务研究中心 > 远程智能医疗

	ERV-Net: An efficient 3D residual neural network for brain tumor segmentation
	Zhou, Xinyu 3; Li, Xuanya 4; Hu, Kai 3; Zhang, Yuan 3; Chen, Zhineng 1; Gao, Xieping 2,3
刊名	EXPERT SYSTEMS WITH APPLICATIONS
	2021-05-15
卷号	170 页码:13
关键词	Brain tumor segmentation 3D convolutional neural network Encoder-decoder Efficiency Lightweight Residual block
ISSN号	0957-4174
DOI	10.1016/j.eswa.2021.114566
通讯作者	Hu, Kai(kaihu@xtu.edu.cn) ; Chen, Zhineng(zhineng.chen@ia.ac.cn)
英文摘要	Brain tumors are the most aggressive and mortal cancers, which lead to short life expectancy. A reliable and efficient automatic or semi-automatic segmentation method is significant for clinical practice. In recent years, deep learning-based methods achieve great success in brain tumor segmentation. However, due to the limitation of parameters and computational complexity, there is still much room for improvement in these methods. In this paper, we propose an efficient 3D residual neural network (ERV-Net) for brain tumor segmentation, which has less computational complexity and GPU memory consumption. In ERV-Net, a computation-efficient network, 3D ShuffleNetV2, is firstly utilized as encoder to reduce GPU memory and improve the efficiency of ERV-Net, and then the decoder with residual blocks (Res-decoder) is introduced to avoid degradation. Furthermore, a fusion loss function, which is composed of Dice loss and Cross-entropy loss, is developed to solve the problems of network convergence and data imbalance. Moreover, a concise and effective post-processing method is proposed to refine the coarse segmentation result of ERV-Net. The experimental results on the dataset of multimodal brain tumor segmentation challenge 2018 (BRATS 2018) demonstrate that ERV-Net achieves the best performance with Dice of 81.8%, 91.21% and 86.62% and Hausdorff distance of 2.70 mm, 3.88 mm and 6.79 mm for enhancing tumor, whole tumor and tumor core, respectively. Besides, ERV-Net also achieves high efficiency compared to the state-of-the-art methods.
资助项目	National Natural Science Foundation of China[61802328] ; National Natural Science Foundation of China[61972333] ; National Natural Science Foundation of China[61771415] ; Natural Science Foundation of Hunan Province of China[2019JJ50606] ; Research Foundation of Education Department of Hunan Province of China[19B561] ; Baidu Pinecone Program
WOS研究方向	Computer Science ; Engineering ; Operations Research & Management Science
语种	英语
出版者	PERGAMON-ELSEVIER SCIENCE LTD
WOS记录号	WOS:000633042500007
资助机构	National Natural Science Foundation of China ; Natural Science Foundation of Hunan Province of China ; Research Foundation of Education Department of Hunan Province of China ; Baidu Pinecone Program
内容类型	期刊论文
源URL	[http://ir.ia.ac.cn/handle/173211/44134]
专题	数字内容技术与服务研究中心_远程智能医疗
通讯作者	Hu, Kai; Chen, Zhineng
作者单位	1.Chinese Acad Sci, Inst Automat, Beijing 100190, Peoples R China 2.Xiangnan Univ, Coll Med Imaging & Inspect, Chenzhou, Peoples R China 3.Xiangtan Univ, Minist Educ, Key Lab Intelligent Comp & Informat Proc, Xiangtan 411105, Peoples R China 4.Baidu Inc, Beijing 100085, Peoples R China
推荐引用方式 GB/T 7714	Zhou, Xinyu,Li, Xuanya,Hu, Kai,et al. ERV-Net: An efficient 3D residual neural network for brain tumor segmentation[J]. EXPERT SYSTEMS WITH APPLICATIONS,2021,170:13.
APA	Zhou, Xinyu,Li, Xuanya,Hu, Kai,Zhang, Yuan,Chen, Zhineng,&Gao, Xieping.(2021).ERV-Net: An efficient 3D residual neural network for brain tumor segmentation.EXPERT SYSTEMS WITH APPLICATIONS,170,13.
MLA	Zhou, Xinyu,et al."ERV-Net: An efficient 3D residual neural network for brain tumor segmentation".EXPERT SYSTEMS WITH APPLICATIONS 170(2021):13.