NPInter v4.0: an integrated database of ncRNA interactions

doi:10.1093/nar/gkz969

CORC > 计算技术研究所 > 中国科学院计算技术研究所 > 中国科学院计算技术研究所期刊论文 > 英文

	NPInter v4.0: an integrated database of ncRNA interactions
	Teng, Xueyi 3,4; Chen, Xiaomin 3,4; Xue, Hua 3,4; Tang, Yiheng 3,4; Zhang, Peng 3; Kang, Quan 3; Hao, Yajing 3,4; Chen, Runsheng 2,3,4; Zhao, Yi 1; He, Shunmin 3,4
刊名	NUCLEIC ACIDS RESEARCH
	2020-01-08
卷号	48 期号:D1 页码:D160-D165
ISSN号	0305-1048
DOI	10.1093/nar/gkz969
英文摘要	Noncoding RNAs (ncRNAs) play crucial regulatory roles in a variety of biological circuits. To document regulatory interactions between ncRNAs and biomolecules, we previously created the NPInter database (http://bigdata.ibp.ac.cn/npinter). Since the last version of NPInter was issued, a rapidly growing number of studies have reported novel interactions and accumulated numerous high-throughput interactome data. We have therefore updated NPInter to its fourth edition in which are integrated 600 000 new experimentally identified ncRNA interactions. ncRNA-DNA interactions derived from ChIRP-seq data and circular RNA interactions have been included in the database. Additionally, disease associations were annotated to the interactingmolecules. The database website has also been redesigned with a more user-friendly interface and several additional functional modules. Overall, NPInter v4.0 now provides more comprehensive data and services for researchers working on ncRNAs and their interactions with other biomolecules.
资助项目	National Natural Science Foundation of China[31701117] ; National Natural Science Foundation of China[31970647] ; National Key R&D Program of China[2016YFC0901702] ; National Key R&D Program of China[2017YFC0907503] ; 13th Five-Year Informatization Plan of Chinese Academy of Sciences[XXH13505-05]
WOS研究方向	Biochemistry & Molecular Biology
语种	英语
出版者	OXFORD UNIV PRESS
WOS记录号	WOS:000525956700024
内容类型	期刊论文
源URL	[http://119.78.100.204/handle/2XEOYT63/14245]
专题	中国科学院计算技术研究所期刊论文_英文
通讯作者	Chen, Runsheng; Zhao, Yi; He, Shunmin
作者单位	1.Chinese Acad Sci, Adv Comp Res Ctr, Inst Comp Technol, Key Lab Intelligent Informat Proc,Bioinformat Res, Beijing 100190, Peoples R China 2.Guangdong Geneway Decoding Biotech Co Ltd, Foshan 528316, Peoples R China 3.Chinese Acad Sci, Ctr Big Data Res Hlth, Inst Biophys, Key Lab RNA Biol, Beijing 100101, Peoples R China 4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Teng, Xueyi,Chen, Xiaomin,Xue, Hua,et al. NPInter v4.0: an integrated database of ncRNA interactions[J]. NUCLEIC ACIDS RESEARCH,2020,48(D1):D160-D165.
APA	Teng, Xueyi.,Chen, Xiaomin.,Xue, Hua.,Tang, Yiheng.,Zhang, Peng.,...&He, Shunmin.(2020).NPInter v4.0: an integrated database of ncRNA interactions.NUCLEIC ACIDS RESEARCH,48(D1),D160-D165.
MLA	Teng, Xueyi,et al."NPInter v4.0: an integrated database of ncRNA interactions".NUCLEIC ACIDS RESEARCH 48.D1(2020):D160-D165.