High-throughput sequencing analysis of the microbial community in coastal intensive mariculture systems

doi:10.1016/j.aquaeng.2018.10.001

CORC > 烟台海岸带研究所 > 中国科学院烟台海岸带研究所 > 中科院海岸带环境过程与生态修复重点实验室 > 近岸生态与环境实验室

	High-throughput sequencing analysis of the microbial community in coastal intensive mariculture systems
	Wang, Jian-Hua ; Lu, Jian ; Zhang, Yu-Xuan ; Wu, Jun ; Zhang, Cui ; Yu, Xiaobin ; Zhang, Zhenhua ; Liu, Hao ; Wang, Wen-Hao
刊名	AQUACULTURAL ENGINEERING
	2018-11
卷号	83 页码:93-102
关键词	High-throughput sequencing Microbial community Conventional mariculture system Recirculating mariculture system
ISSN号	0144-8609
DOI	10.1016/j.aquaeng.2018.10.001
产权排序	[Wang, Jian-Hua ; Lu, Jian ; Zhang, Yu-Xuan ; Zhang, Cui ; Yu, Xiaobin] Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Environm Proc & Ecol Remediat, Yantai 264003, Shandong, Peoples R China ; [Lu, Jian ; Zhang, Yu-Xuan ; Wu, Jun ; Zhang, Cui ; Yu, Xiaobin] Univ Chinese Acad Sci, Beijing 100049, Peoples R China ; [Wu, Jun] Chinese Acad Sci, Qinghai Inst Salt Lakes, Xining 810008, Qinghai, Peoples R China ; [Zhang, Zhenhua] Ludong Univ, Sch Resources & Environm Engn, Yantai 264025, Shandong, Peoples R China ; [Liu, Hao] Shandong Oriental Ocean Sci Tech Co Ltd, Yantai 264003, Shandong, Peoples R China ; [Wang, Wen-Hao] Yantai Fisheries Res Inst, Yantai 264003, Shandong, Peoples R China
文献子类	Article
英文摘要	The conventional and recirculating mariculture systems are two typical intensive mariculture systems in the coastal zone. This study used high-throughput sequencing method to investigate the structural profiles of microbial communities in conventional and recirculating mariculture farms. The results showed that 13,842 OTUs (operational taxonomic units) were detected at a similarity level of 97%. Conventional and recirculating systems exhibited significant difference in microbialcommunity based on the results of the taxonomy and relative abundance of bacteria. Among the top 10 genera in coastal intensive mariculture systems, the predominant bacteria in the conventional intensive mariculture system were Pseudofulvibacter, Polaribacter, Glaciecola, Crocinitomix, Colwellia, Oleispira, and Balneola, while those in the recirculating systems were Vibrio, Alteromonas, and Pseudoalteromonas. Bacterial communities of different fish ponds suggested that the bacterial groups exhibited fish-specific or water treatment stage-specific features. Potential pathogens such as Vibrio, Arcobacter, Pseudoalteromonas, and Shewanella were readily accumulated as dominant bacteria in the recirculating mariculture system. The detection of similar potential pathogens in both the mariculture systems and the adjacent coastal water indicate that the mariculture farms without recirculating system could be the hotspots of pathogens and have great influences on the surrounding coastal environment. The wastewater treatment units used in recirculating farm could remove bacteria effectively, suggesting that the recirculating mariculture system may be more environmentally friendly than the conventional mariculture system.
WOS关键词	ANTIBIOTIC-RESISTANCE GENES ; FISH FARM ; BACTERIAL PATHOGENS ; WASTE-WATER ; AQUACULTURE ; DIVERSITY ; SHRIMP ; SULFONAMIDE ; HEALTH ; IMPACT
WOS研究方向	Agricultural Engineering ; Fisheries
语种	英语
WOS记录号	WOS:000452943400011
资助机构	National Natural Science Foundation of China [41671319] ; One Hundred Talents Program of Chinese Academy of Sciences [Y629041021, Y610061033] ; Two-Hundred Talents Plan of Yantai [Y739011021] ; CAS Key Research Program of Frontier Sciences [QYZDJ-SSW-DQC015] ; Research Program of CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation [1189010002]
内容类型	期刊论文
源URL	[http://ir.yic.ac.cn/handle/133337/24569]
专题	烟台海岸带研究所_近岸生态与环境实验室烟台海岸带研究所_海岸带生物学与生物资源利用所重点实验室烟台海岸带研究所_中科院海岸带环境过程与生态修复重点实验室中国科学院烟台海岸带研究所
作者单位	1.Yantai Fisheries Res Inst, Yantai 264003, Shandong, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China; 3.Chinese Acad Sci, Qinghai Inst Salt Lakes, Xining 810008, Qinghai, Peoples R China; 4.Ludong Univ, Sch Resources & Environm Engn, Yantai 264025, Shandong, Peoples R China; 5.Shandong Oriental Ocean Sci Tech Co Ltd, Yantai 264003, Shandong, Peoples R China; 6.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Key Lab Coastal Environm Proc & Ecol Remediat, Yantai 264003, Shandong, Peoples R China;
推荐引用方式 GB/T 7714	Wang, Jian-Hua,Lu, Jian,Zhang, Yu-Xuan,et al. High-throughput sequencing analysis of the microbial community in coastal intensive mariculture systems[J]. AQUACULTURAL ENGINEERING,2018,83:93-102.
APA	Wang, Jian-Hua.,Lu, Jian.,Zhang, Yu-Xuan.,Wu, Jun.,Zhang, Cui.,...&Wang, Wen-Hao.(2018).High-throughput sequencing analysis of the microbial community in coastal intensive mariculture systems.AQUACULTURAL ENGINEERING,83,93-102.
MLA	Wang, Jian-Hua,et al."High-throughput sequencing analysis of the microbial community in coastal intensive mariculture systems".AQUACULTURAL ENGINEERING 83(2018):93-102.