The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability

	The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability
	Zhang, Jiyu; Wu, Fan; Yan, Qi; John, Ulrik P.; Cao, Mingshu; Xu, Pan; Zhang, Zhengshe; Ma, Tiantian; Zong, Xifang; Li, Jie
刊名	PLANT BIOTECHNOLOGY JOURNAL
	2020
关键词	Cleistogenes songorica genome assembly allotetraploid dimorphic flower cleistogamy drought tolerance
英文摘要	Cleistogenes songorica (2n = 4x = 40) is a desert grass with a unique dimorphic flowering mechanism and an ability to survive extreme drought. Little is known about the genetics underlying drought tolerance and its reproductive adaptability. Here, we sequenced and assembled a high-quality chromosome-level C. songorica genome (contig N50 = 21.28 Mb). Complete assemblies of all telomeres, and of ten chromosomes were derived. C. songorica underwent a recent tetraploidization (similar to 19 million years ago) and four major chromosomal rearrangements. Expanded genes were significantly enriched in fatty acid elongation, phenylpropanoid biosynthesis, starch and sucrose metabolism, and circadian rhythm pathways. By comparative transcriptomic analysis we found that conserved drought tolerance related genes were expanded. Transcription of CsMYB genes was associated with differential development of chasmogamous and cleistogamous flowers, as well as drought tolerance. Furthermore, we found that regulation modules encompassing miRNA, transcription factors and target genes are involved in dimorphic flower development, validated by overexpression of CsAP2_9 and its targeted miR172 in rice. Our findings enable further understanding of the mechanisms of drought tolerance and flowering in C. songorica, and provide new insights into the adaptability of native grass species in evolution, along with potential resources for trait improvement in agronomically important species.
内容类型	期刊论文
源URL	[http://210.75.249.4/handle/363003/60222]
专题	西北高原生物研究所_中国科学院西北高原生物研究所
推荐引用方式 GB/T 7714	Zhang, Jiyu,Wu, Fan,Yan, Qi,et al. The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability[J]. PLANT BIOTECHNOLOGY JOURNAL,2020.
APA	Zhang, Jiyu.,Wu, Fan.,Yan, Qi.,John, Ulrik P..,Cao, Mingshu.,...&Wang, Yanrong.(2020).The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability.PLANT BIOTECHNOLOGY JOURNAL.
MLA	Zhang, Jiyu,et al."The genome of Cleistogenes songorica provides a blueprint for functional dissection of dimorphic flower differentiation and drought adaptability".PLANT BIOTECHNOLOGY JOURNAL (2020).