Alterations of the gut microbiome of largemouth bronze gudgeon (Coreius guichenoti) suffering from furunculosis | |
Li, Tongtong4,5,6; Long, Meng6; Ji, Cheng3; Shen, Zhixin2; Gatesoupe, Francois-Joel1; Zhang, Xujie6; Zhang, Qianqian6; Zhang, Lanli6; Zhao, Yuanli6; Liu, Xinhua6 | |
刊名 | SCIENTIFIC REPORTS |
2016-07-28 | |
卷号 | 6期号:1页码:9 |
ISSN号 | 2045-2322 |
DOI | 10.1038/srep30606 |
英文摘要 | High-throughput sequencing was applied to compare the intestinal microbiota in largemouth bronze gudgeon either healthy or affected by furunculosis. Proteobacteria, Actinobacteria, Tenericutes, Firmicutes and Bacteroidetes were detected as the predominant bacterial phyla in the gut of both diseased and healthy fish. The abundance of Proteobacteria differed significantly between the two groups of fish, mainly due to the overwhelming prevalence of Aeromonas in the diseased fish (81%+/- 17%), while the genus was unevenly spread among the apparently healthy fish (33%+/- 33%). The bacterial diversity in the intestine of diseased fish was markedly lower than in healthy fish. Analysis revealed the significant dissimilarity between the gut microbiota of diseased and healthy fish. The bacterial profiles in the gut were further characterized with the 28 phylotypes that were shared by the two groups. In diseased fish, two shared OTUs (OTU0001 and OTU0013) were closely related to Aeromonas salmonicida, their total proportion exceeding 70% of the sequences in diseased fish, while averaging 5.2%+/- 4.6% in the healthy fish. This result suggested the presence of healthy carriers of pathogenic A. salmonicida among the farmed fish, and the gut appeared as a probable infection source for furunculosis in largemouth bronze gudgeon. |
资助项目 | FEBL project[2011FBZ26] ; Jiangsu Provincial Department of Science and Technology project[D2015-11] ; Natural Science Foundation of China[30670112] ; Natural Science Foundation of China[31070112] |
WOS关键词 | ATYPICAL AEROMONAS-SALMONICIDA ; TROUT ONCORHYNCHUS-MYKISS ; GADUS-MORHUA L ; RAINBOW-TROUT ; GASTROINTESTINAL-TRACT ; INTESTINAL MICROFLORA ; BACTERIAL COMMUNITIES ; SUBSP SALMONICIDA ; ATLANTIC SALMON ; WATER FISH |
WOS研究方向 | Science & Technology - Other Topics |
语种 | 英语 |
出版者 | NATURE PUBLISHING GROUP |
WOS记录号 | WOS:000380981300001 |
资助机构 | FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Jiangsu Provincial Department of Science and Technology project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China |
内容类型 | 期刊论文 |
源URL | [http://ir.ihb.ac.cn/handle/342005/34603] |
专题 | 水生生物研究所_鱼类生物学及渔业生物技术研究中心_期刊论文 |
通讯作者 | Ji, Cheng; Li, Aihua |
作者单位 | 1.IFREMER, Ctr Brest, UMR 1419, INRA,Nutr Metab & Aquaculture, F-29280 Plouzane, France 2.Qinghai Prov Fishery Environm Monitoring Ctr, Xining 810000, Peoples R China 3.Soochow Univ, Sch Basic Med & Biol Sci, Ctr Circadian Clocks, Suzhou 215123, Peoples R China 4.Chinese Acad Sci, Chengdu Inst Biol, Environm Microbiol Key Lab Sichuan Prov, Chengdu 610041, Peoples R China 5.Chinese Acad Sci, Key Lab Environm & Appl Microbiol, Chengdu 610041, Peoples R China 6.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China |
推荐引用方式 GB/T 7714 | Li, Tongtong,Long, Meng,Ji, Cheng,et al. Alterations of the gut microbiome of largemouth bronze gudgeon (Coreius guichenoti) suffering from furunculosis[J]. SCIENTIFIC REPORTS,2016,6(1):9. |
APA | Li, Tongtong.,Long, Meng.,Ji, Cheng.,Shen, Zhixin.,Gatesoupe, Francois-Joel.,...&Li, Aihua.(2016).Alterations of the gut microbiome of largemouth bronze gudgeon (Coreius guichenoti) suffering from furunculosis.SCIENTIFIC REPORTS,6(1),9. |
MLA | Li, Tongtong,et al."Alterations of the gut microbiome of largemouth bronze gudgeon (Coreius guichenoti) suffering from furunculosis".SCIENTIFIC REPORTS 6.1(2016):9. |
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