Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina | |
J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li | |
刊名 | Archives of Microbiology |
2017 | |
卷号 | 199期号:7页码:1003-1009 |
通讯作者 | 韩晓增 |
中文摘要 | A Gram-negative, non-spore-forming, aerobic rods, strain YIC4121(T) was isolated from root nodule of Sesbania cannabina grown in Dongying (Yellow River Delta), Shandong Province, PR China. Based on phylogenetic analysis of 16 S rRNA gene sequences, strain YIC4121(T) was assigned to the genus Agrobacterium with 99.7, 99.3, 99.0, 98.8 and 98.7% sequence similarities to Agrobacterium radiobacter LMG140(T), A. pusense NRCPB10(T), A. arsenijevicii KFB 330(T), A. nepotum 39/7(T) and A. larrymoorei ATCC51759(T). Analysis of the concatenated housekeeping genes (recA-atpD-glnII), showed lower sequence similarities (<= 94.6%) between strain YIC4121(T) and other recognized Agrobacterium species. Strain YIC4121(T) shared whole-genome average nucleotide identities (ANI) 87.94, 91.27 and 77.42%, with A. pusense NRCPB10(T), A. radiobacter LMG140(T) and A. larrymoorei ATCC51759(T). The predominant cellular fatty acids were C-19:0 cyclo omega 8c, summed feature 2 - (C-12:0 aldehyde/unknown 10.9525), summed feature 8 (C-18:1.omega c/ C-18:1 omega 6c), C-16:0 3 OH and C-16:0. The G + C content of strain - YIC4121(T) was 59.80 mol%. Tween 80, lactulose, citric acid, alpha-ketoglutaric acid, glycyl- L-glutamic acid and 2, 3butanediol could not be utilized as carbon source, distinguishing strain YIC4121(T) from the other related species. Based on the distinctly genetic and phenotypic dissimilarity, a novel species Agrobacterium deltaense sp. nov. is proposed with YIC4121(T) (= HAMBI 3654(T) = LMG 2928(T)) as the type strain. |
WOS记录号 | WOS:000407367500006 |
内容类型 | 期刊论文 |
源URL | [http://ir.iga.ac.cn/handle/131322/7639] |
专题 | 东北地理与农业生态研究所_湿地与全球变化学科组_期刊论文 |
推荐引用方式 GB/T 7714 | J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li. Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina[J]. Archives of Microbiology,2017,199(7):1003-1009. |
APA | J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li.(2017).Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina.Archives of Microbiology,199(7),1003-1009. |
MLA | J. Yan, Y. Li, X. Z. Han, W. F. Chen, W. X. Zou, Z. H. Xie and M. Li."Agrobacterium deltaense sp nov., an endophytic bacteria isolated from nodule of Sesbania cannabina".Archives of Microbiology 199.7(2017):1003-1009. |
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