ChickVD: a sequence variation database for the chicken genome

doi:10.1093/nar/gki092

CORC > 北京大学 > 生命科学学院

	ChickVD: a sequence variation database for the chicken genome
	Wang, J ; He, XM ; Ruan, J ; Dai, MT ; Chen, J ; Zhang, Y ; Hu, YF ; Ye, C ; Li, ST ; Cong, LJ ; Fang, L ; Liu, B ; Li, SG ; Wang, J ; Burt, DW ; Wong, GKS ; Yu, J ; Yang, HM ; Wang, J
刊名	核酸研究
	2005
关键词	INFORMATION RESOURCE UPDATE MODELS
DOI	10.1093/nar/gki092
英文摘要	Working in parallel with the efforts to sequence the chicken (Gallus gallus) genome, the Beijing Genomics Institute led an international team of scientists from China, USA, UK, Sweden, The Netherlands and Germany to map extensive DNA sequence variation throughout the chicken genome by sampling DNA from domestic breeds. Using the Red Jungle Fowl genome sequence as a reference, we identified 3.1 million non-redundant DNA sequence variants. To facilitate the application of our data to avian genetics and to provide a foundation for functional and evolutionary studies, we created the 'Chicken Variation Database' (ChickVD). A graphical MapView shows variants mapped onto the chicken genome in the context of gene annotations and other features, including genetic markers, trait loci, cDNAs, chicken orthologs of human disease genes and raw sequence traces. ChickVD also stores information on quantitative trait loci using data from collaborating institutions and public resources. Our data can be queried by search engine and homology-based BLAST searches. ChickVD is publicly accessible at http://chicken.genomics.org.cn.; Biochemistry & Molecular Biology; SCI(E); PubMed; 20; ARTICLE; ,SI; D438-D441; 33
语种	英语
内容类型	期刊论文
源URL	[http://ir.pku.edu.cn/handle/20.500.11897/346461]
专题	生命科学学院
推荐引用方式 GB/T 7714	Wang, J,He, XM,Ruan, J,et al. ChickVD: a sequence variation database for the chicken genome[J]. 核酸研究,2005.
APA	Wang, J.,He, XM.,Ruan, J.,Dai, MT.,Chen, J.,...&Wang, J.(2005).ChickVD: a sequence variation database for the chicken genome.核酸研究.
MLA	Wang, J,et al."ChickVD: a sequence variation database for the chicken genome".核酸研究 (2005).