PlantTFDB 2.0: update and improvement of the comprehensive plant   transcription factor database

doi:10.1093/nar/gkq1141

CORC > 北京大学 > 生命科学学院

	PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database
	Zhang, He ; Jin, Jinpu ; Tang, Liang ; Zhao, Yi ; Gu, Xiaocheng ; Gao, Ge ; Luo, Jingchu
刊名	核酸研究
	2011
关键词	RESOURCE PLATFORM GENOMICS
DOI	10.1093/nar/gkq1141
英文摘要	We updated the plant transcription factor (TF) database to version 2.0 (PlantTFDB 2.0, http://planttfdb.cbi.pku.edu.cn) which contains 53 319 putative TFs predicted from 49 species. We made detailed annotation including general information, domain feature, gene ontology, expression pattern and ortholog groups, as well as cross references to various databases and literature citations for these TFs classified into 58 newly defined families with computational approach and manual inspection. Multiple sequence alignments and phylogenetic trees for each family can be shown as Weblogo pictures or downloaded as text files. We have redesigned the user interface in the new version. Users can search TFs with much more flexibility through the improved advanced search page, and the search results can be exported into various formats for further analysis. In addition, we now provide web service for advanced users to access PlantTFDB 2.0 more efficiently.; Biochemistry & Molecular Biology; SCI(E); PubMed; 116; ARTICLE; Database issue; D1114-D1117; 39
语种	英语
内容类型	期刊论文
源URL	[http://ir.pku.edu.cn/handle/20.500.11897/344271]
专题	生命科学学院
推荐引用方式 GB/T 7714	Zhang, He,Jin, Jinpu,Tang, Liang,et al. PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database[J]. 核酸研究,2011.
APA	Zhang, He.,Jin, Jinpu.,Tang, Liang.,Zhao, Yi.,Gu, Xiaocheng.,...&Luo, Jingchu.(2011).PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database.核酸研究.
MLA	Zhang, He,et al."PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database".核酸研究 (2011).