| Chickvd: a sequence variation database for the chicken genome | |
| Wang, J; He, XM; Ruan, J; Dai, MT; Chen, J; Zhang, Y; Hu, YF; Ye, C; Li, ST; Cong, LJ | |
| 刊名 | Nucleic acids research
 |
| 2005 | |
| 卷号 | 33页码:D438-d441 |
| ISSN号 | 0305-1048 |
| DOI | 10.1093/nar/gki092 |
| 通讯作者 | Wang, j() ; Wang, j() ; Wang, j(wang@genomics.org.cn) |
| 英文摘要 | Working in parallel with the efforts to sequence the chicken (gallus gallus) genome, the beijing genomics institute led an international team of scientists from china, usa, uk, sweden, the netherlands and germany to map extensive dna sequence variation throughout the chicken genome by sampling dna from domestic breeds. using the red jungle fowl genome sequence as a reference, we identified 3.1 million non-redundant dna sequence variants. to facilitate the application of our data to avian genetics and to provide a foundation for functional and evolutionary studies, we created the 'chicken variation database' (chickvd). a graphical mapview shows variants mapped onto the chicken genome in the context of gene annotations and other features, including genetic markers, trait loci, cdnas, chicken orthologs of human disease genes and raw sequence traces. chickvd also stores information on quantitative trait loci using data from collaborating institutions and public resources. our data can be queried by search engine and homology-based blast searches. chickvd is publicly accessible at http://chicken.genomics.org.cn. |
| WOS关键词 | INFORMATION ; RESOURCE ; UPDATE ; MODELS |
| WOS研究方向 | Biochemistry & Molecular Biology |
| WOS类目 | Biochemistry & Molecular Biology |
| 语种 | 英语 |
| 出版者 | OXFORD UNIV PRESS |
| WOS记录号 | WOS:000226524300090 |
| 内容类型 | 期刊论文 |
| URI标识 | http://www.corc.org.cn/handle/1471x/2377395 |
| 专题 | 中国科学院大学 |
| 通讯作者 | Wang, J; Wang, J; Wang, J |
| 作者单位 | 1.Chinese Acad Sci, Beijing Genom Inst, Beijing 101300, Peoples R China 2.Peking Univ, Coll Life Sci, Beijing 100871, Peoples R China 3.Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China 4.Roslin Inst, Roslin EH25 9PS, Midlothian, Scotland 5.Univ Washington, Dept Med, Genome Ctr, Seattle, WA 98195 USA 6.Zhejiang Univ, James D Watson Inst Genome Sci, Hangzhou Genom Inst, Key Lab Bioinformat Zhejiang Prov, Hangzhou 310007, Peoples R China 7.Aarhus Univ, Inst Human Genet, DK-8000 Aarhus C, Denmark 8.Univ So Denmark, Dept Biochem & Mol Biol, DK-5230 Odense M, Denmark |
| 推荐引用方式 GB/T 7714 | Wang, J,He, XM,Ruan, J,et al. Chickvd: a sequence variation database for the chicken genome[J]. Nucleic acids research,2005,33:D438-d441. |
| APA | Wang, J.,He, XM.,Ruan, J.,Dai, MT.,Chen, J.,...&Wang, J.(2005).Chickvd: a sequence variation database for the chicken genome.Nucleic acids research,33,D438-d441. |
| MLA | Wang, J,et al."Chickvd: a sequence variation database for the chicken genome".Nucleic acids research 33(2005):D438-d441. |
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