De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat

doi:10.1016/j.ygeno.2015.04.003

	De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat
	Zhang, Jinpeng; Liu, Weihua; Han, Haiming; Song, Liqiang; Bai, Li; Gao, Zhihui; Zhang, Yan; Yang, Xinming; Li, Xiuquan; Gao, Ainong
刊名	GENOMICS
	2015
卷号	106 期号:2 页码:129-136
关键词	Transcriptomes P genome Disease resistance Genetic diversity Wild relative Agropyron cristatum
ISSN号	0888-7543
DOI	10.1016/j.ygeno.2015.04.003
通讯作者	Zhang, Jinpeng
英文摘要	Agropyron cristatum is a wild grass of the tribe Triticeae that is widely grown in harsh environments. As a wild relative of wheat, A. cristatum carries many resistance genes that could be used to broaden the genetic diversity of wheat Here, we report the transcriptome sequencing of the flag leaf and young spike tissues of a representative tetraploid A. cristatum. More than 90 million reads from the two tissues were assembled into 73,664 unigenes. All unigenes were functionally annotated against the KEGG, COG, and Gene Ontology databases and predicted long non-coding RNAs. Pfam prediction demonstrates that A. cristatum carries an abundance of stress resistance genes. The extent of specific genes and rare alleles make A. cristatum a vital genetic reservoir for the improvement of wheat. Altogether, the available gene resources in A. cristatum facilitate efforts to harness the genetic diversity of wild relatives to enhance wheat. (C) 2015 Elsevier Inc. All rights reserved.
学科主题	Biotechnology & Applied Microbiology ; Genetics & Heredity
语种	英语
出版者	ACADEMIC PRESS INC ELSEVIER SCIENCE
WOS记录号	WOS:000359754600009
内容类型	期刊论文
源URL	[http://111.203.20.206/handle/2HMLN22E/4682]
专题	作物科学研究所_种质资源保存与研究中心
作者单位	Chinese Acad Agr Sci, Inst Crop Sci, Natl Key Facil Crop Gene Resources & Genet Improv, Beijing 100081, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Jinpeng,Liu, Weihua,Han, Haiming,et al. De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat[J]. GENOMICS,2015,106(2):129-136.
APA	Zhang, Jinpeng.,Liu, Weihua.,Han, Haiming.,Song, Liqiang.,Bai, Li.,...&Li, Lihui.(2015).De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat.GENOMICS,106(2),129-136.
MLA	Zhang, Jinpeng,et al."De novo transcriptome sequencing of Agropyron cristatum to identify available gene resources for the enhancement of wheat".GENOMICS 106.2(2015):129-136.