High-Throughput Determination of the Site-Specific N-Sialoglycan Occupancy Rates by Differential Oxidation of Glycoproteins Followed with Quantitative Glycoproteomics Analysis

	High-Throughput Determination of the Site-Specific N-Sialoglycan Occupancy Rates by Differential Oxidation of Glycoproteins Followed with Quantitative Glycoproteomics Analysis
	Zhang, Zhang 1,2; Sun, Zhen 1,2; Zhu, Jun 1,2; Liu, Jing 1,2; Huang, Guang 1,2; Ye, Mingliang 1; Zou, Hanfa 1
刊名	analytical chemistry
	2014-10-07
卷号	86 期号:19 页码:9830-9837
英文摘要	sialylated glycoproteins, which play important roles in tumor progression, have been extensively analyzed for the discovery of potential biomarkers for cancer diagnosis and prognosis. the site-specific n-sialoglycan occupancy rates of glycoproteins reflect the activities of glycosyltransferases and glycosidases in vivo and could be novel disease biomarkers. however, a high-throughput method to determine the n-sialoglycan occupancy rates is not available. on the basis of the fact that dihydroxy of sialic acid of glycan chains in glycoproteins can be specifically oxidized to aldehyde in mild periodate concentration while all types of glycan chains can be oxidized in high periodate concentration, we developed a modified protein-level hydrazide chemistry method for the determination of the n-sialoglycan occupancy rates. this method was first applied to determine the n-sialoglycan occupancy rates of two glycosites on human transferrin. these two sites were found to be fully sialylated and the n-sialoglycan occupancy rates were found to under significant decrease after the neuraminidase treatment. this method was then applied to analyze n-sialoglycan occupancy rates in proteome samples. we determined 496 and 632 site-specific n-sialoglycan occupancy rates on 334 and 394 proteins from hepatocellular carcinoma (hcc) and normal human liver tissues, respectively. by comparing the n-sialoglycan occupancy rates between the above two samples, we determined 76 n-sialoglycosites with more than a 2-fold change. this method was demonstrated to be an effective and high-throughput method for the analysis of the n-sialoglycan occupancy rates.
WOS标题词	science & technology ; physical sciences
类目[WOS]	chemistry, analytical
研究领域[WOS]	chemistry
关键词[WOS]	mass-spectrometry ; alpha-2,6 sialyltransferase ; hepatocellular-carcinoma ; fucosyl-transferase ; proteome analysis ; sambucus-nigra ; expression ; glycopeptides ; cells ; serum
收录类别	SCI
语种	英语
WOS记录号	WOS:000343017100070
公开日期	2016-05-09
内容类型	期刊论文
源URL	[http://cas-ir.dicp.ac.cn/handle/321008/145629]
专题	大连化学物理研究所_中国科学院大连化学物理研究所
作者单位	1.Chinese Acad Sci, Dalian Inst Chem Phys, CAS Key Lab Separat Sci Analyt Chem, Natl Chromatog R&A Ctr, Dalian 116023, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
推荐引用方式 GB/T 7714	Zhang, Zhang,Sun, Zhen,Zhu, Jun,et al. High-Throughput Determination of the Site-Specific N-Sialoglycan Occupancy Rates by Differential Oxidation of Glycoproteins Followed with Quantitative Glycoproteomics Analysis[J]. analytical chemistry,2014,86(19):9830-9837.
APA	Zhang, Zhang.,Sun, Zhen.,Zhu, Jun.,Liu, Jing.,Huang, Guang.,...&Zou, Hanfa.(2014).High-Throughput Determination of the Site-Specific N-Sialoglycan Occupancy Rates by Differential Oxidation of Glycoproteins Followed with Quantitative Glycoproteomics Analysis.analytical chemistry,86(19),9830-9837.
MLA	Zhang, Zhang,et al."High-Throughput Determination of the Site-Specific N-Sialoglycan Occupancy Rates by Differential Oxidation of Glycoproteins Followed with Quantitative Glycoproteomics Analysis".analytical chemistry 86.19(2014):9830-9837.